So yes, that is another aspect.
If you have four pin fans, set it to PWM. If you have three pin fans, set it to DC.
Then, set up a custom curve or select a preset profile if there is one, however you wish to do it and based on what options are available in the fan controls. What is the model of this motherboard?
Then also set the "thermal source" to something other than CPU. What you set that particular fan to might depend on where it is located but generally you'd want it set to the same source as the rest of the case fan headers.