I did not realize you had an "issue". You mean the card is in but it is not working? What are the symptoms?
And yes, a 2-year old motherboard should have a 1.5V AGP. That's fine. If you have a Dell or some such, your PSU is 300W. Get a 500-550W PSU then.
You may still continue to have problems though. There is a suspicion that the current batch of X1950 PRO AGPs is using faulty digital voltage regulators which cause crashes and lockups.