bitwright :
If the sys_fan connectors are 4-pin instead of 3-pin then the fans can be system controlled (as long as they are also 4-pin).
If you want the quietest system though, it's not the best idea to go adding fans, as each fan you add will make things louder. If you are not happy with your system's cooling, consider moving the top fan to the front as an intake (I'm assuming it's an exhaust right now?) and adding only one extra fan. Or, buying 2 quieter 140mm fans for the front and disabling/removing the top fan. This will keep your system cool and provide positive pressure. I don't think you will need to fill all 4 fan mounts in this case to keep your system cool, especially if you are concerned about noise.
Now that seems like a great idea. The top fan is a 120mm, so I'm thinking maybe going with your second idea, and just getting two front in-take fans and disabling the top fan. That way, I can have 3 fans, two for front in-take, and one in the rear. However, if you seen the design, will it really help with positive pressure (I know that's what you are suppose to have)? The reason I ask this is because, there is an opening in the top of the case, and that's the only opening for the front as the front panel is completely solid. Don't know much about physics (or if I should) to know if air can travel down into a fan and take in it in.
When I was researching, all I kept seeing was "get a PWN fan and use CPU_OPT" and not to use the 3 other fan headers. But my SYS_FAN headers do have 4 pins, so I assume they will also be controlled correctly.
With that being said, what do you suggest? I know noctua is everyone's favorite, but I was looking at BeQuiet and Corsair and Cooler Master, and just want to look at my options. Not to mention that color scheme for noctua is a total no-no.