You don't enter the licence key at all anymore. Its not needed, Microsoft have the details of old licence, your PC and possibly your email address recorded on their servers. You have a digital entitlement to always install win 10 on that PC again, unless you later move the licence.
When you reach the screen asking for licence, click "I don't have a key" and win 10 will continue to install and reactivate once finished. It shouldn't ask for a key twice at all.
Do you have to re enter language choices and everything else twice as well or just the serial number? If its doubling everything, what I think is actually occurring is installer is running twice. Sometimes windows installer goes mental and after one of the restarts that happen at step 14 here -
https://www.tenforums.com/tutorials/1950-clean-install-windows-10-a.html - it can just restart the installer again and ask you to repeat actions. I don't lnow why but 1 fix is to remove USB at this stage as the install is on the hdd by then.