Motherboard & GPU I/O Ports Not Properly Aligned?

Dylan SJ Perez

Prominent
Mar 18, 2017
27
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So I just finished building my new system and everything is working well, however I've noticed that firstly, the motherboard I/O ports aren't lining up properly with the back plate and the GPU I/O ports seem a bit too high compared to their slot, I know it's hard to explain so I've attached photos, any help is appreciated!

It's worth mentioning that my brother also has the same issue on his PC.

Motherboard: https://drive.google.com/open?id=0Bz_TrfPiYC5lY1ZSYk93c0RRNTg

GPU: https://drive.google.com/open?id=0Bz_TrfPiYC5lQ2VFVlhCV1h2RUk

Many thanks,

Dylan