My motherboard is at 127 degrees Celsius?!?!?! What is wrong?

Elf_Knight

Honorable
Nov 9, 2013
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I just downloaded Speccy to check the temperatures on my computer. At idle my system is normal.
My i3 4130 is 34 degrees C (I have the Noctua Low profile CPU cooler)
My GTX 1060 3gb from Gigabyte is 36 degrees C
My SSD is 28 degrees and my HDD is 30

I don't do intensive tasks on my PC except for gaming. However, just last night I started using NiceHash to mine bitcoins. I only did this for a couple hours and everything seemed fine. Keep in mind back then I just had one noctua fan as exhaust and my CPU cooler and gpu fan.
My GPU was at 69 degrees according to MSI Afterburner so I thought that was normal but I couldn't tell what my CPU was.

I then downloaded Speccy today and found out my motherboard (an MSI LGA 1150 micro atx board) is abnormally high and I don't know if the software is out of wack or what.
I installed two intake fans at the front of my case which has a perforated front panel for intake with dust filters everywhere in my case.
My case is the Fractal Design Focus G Mini
All my standoffs are installed.

I took off my CPU cooler and reapplied thermal paste and cleaned off the old stuff. I am using the Noctua NT-H1 thermal compound.
But my motherboard temps are still crazy high.
Is there any other trustworthy software to record temps? I can't afford to buy a new motherboard and I don't want my PC to get broken.

During class I was running NiceHash to mine bitcoins for about 2 and a half hours but I switched it off now. Surely it can't be that much different then gaming?
Sorry for the massive wall of text but I am really worried about these temps. Is the software broken? How do I fix this?

Many thanks in advance!!