I'm having issues with my computer: portable HDs stop responding with a variety of I/O, paging and cache errors and disconnecting. It took me a while to understand what was going on as the HDs are fine, with good SMART data, perfect connections through their OEM cables and no bad blocks. It's the mobo temperature that triggers it.
I'm tracking them on HWiNFO. I'm not entirely sure which component of the motherboard is causing the issue. Two temperatures rise at once when the failures happen, the PCH and an unidentified one, "Temperature #5", which I suspect is the VRM. They don't get really hot, 58ºC for the PCH and 56ºC for the maybe-VRM is enough to trigger the failures, but it is what it is, that's when issues start happening. The mobo isn't new after all.
I have a M.2 SSD with my OS install. It occasionally gets hot and is on the underside of the motherboard, directly under the PCH. I'm sure it's worsening the PCH temps.
What can I do to mitigate or hopefully solve the issue?
My build is a watercooled mini ITX. The other temperatures are fine. I've setup Fan Control to respond to the PCH/maybe-VRM temperatures besides CPU. The PCH has a heatsink and I'm thinking of repasting it, with thermal paste if the gap allows. Other candidates for a do-over are the VRM and the M.2. I've seen people just stick thermal pads over chipsets reasoning the pad would take the heat away and distribute it on a larger surface, but without a heatsink wouldn't also trap heat there for longer?
All of these are band-aids I know, but I have no idea how to begin solving the root problem and right now I can't simply bin that mobo and get a new one.
I'm tracking them on HWiNFO. I'm not entirely sure which component of the motherboard is causing the issue. Two temperatures rise at once when the failures happen, the PCH and an unidentified one, "Temperature #5", which I suspect is the VRM. They don't get really hot, 58ºC for the PCH and 56ºC for the maybe-VRM is enough to trigger the failures, but it is what it is, that's when issues start happening. The mobo isn't new after all.
I have a M.2 SSD with my OS install. It occasionally gets hot and is on the underside of the motherboard, directly under the PCH. I'm sure it's worsening the PCH temps.

What can I do to mitigate or hopefully solve the issue?
My build is a watercooled mini ITX. The other temperatures are fine. I've setup Fan Control to respond to the PCH/maybe-VRM temperatures besides CPU. The PCH has a heatsink and I'm thinking of repasting it, with thermal paste if the gap allows. Other candidates for a do-over are the VRM and the M.2. I've seen people just stick thermal pads over chipsets reasoning the pad would take the heat away and distribute it on a larger surface, but without a heatsink wouldn't also trap heat there for longer?
All of these are band-aids I know, but I have no idea how to begin solving the root problem and right now I can't simply bin that mobo and get a new one.