Whether the original recovery partition was too small, causing the Windows installer to create a newer, larger one, or the original partition was missing it's NO_DRIVE_LETTER attribute, don't delete the partition, just remove the drive letter.
If Disk Management doesn't allow you to remove the drive letter, you can remove the drive letter by opening an Administrative Command Prompt and issuing the following instruction:
mountvol d: /d
This will remove the mount point for drive letter d: and your extra partition will no longer pester you through Windows Explorer. Of course, if your extra partition is not drive letter d:, use the correct letter for it.
And of course, don't remove drive letters for partitions you want to...