Okay cheersI suspect that the boot process is halted for no cpu, which would happen before the step where it initializes any periphials like the usb controller.
None of my USB ports work even the one on the motherboard without the CPUWithout a cpu and a cooler, nothing is going to work.
The front panel usb ports will work when the front panel connectors are plugged into the motherboard.
As a practical matter, I find it best to test out everything outside of the case before installing it into the case.