You can put a MicroATX motherboard in a regular ATX case, but not the other way around. If you want to continue using the Sony case, I recommend getting a microATX board. Why do you want a new motherboard? Due to the licensing, you will have to get a new copy of Windows, and I would recommend a new PSU also. If you are going that far, you might as well get a new case also, then you won't be limited as to what size motherboard you get.