You should be able to connect the two antenna leads to any two of the three terminals. Technically only one antenna needs to be connected for it to work (when I accidentally broke an antenna cable on my laptop, I ran with a single antenna for a couple years.)
On the two terminal WiFi cards, the antennas are usually oriented perpendicular to each other. That way, no matter which you orient the laptop, one antenna is (usually) in the proper orientation for a good signal. The newer 2-antenna and 3-antenna WiFi cards are usually 802.11ac with SU-MIMO. They use the extra antennas to transmit multiple signals over the same frequency. The signals are distinguished from each other by the slightly different signal strength on each antenna...