The CPU alredy has a secure processor, the issue is people are able to get around the physical seperation of data. Security is no longer just an application level requirement, but a processor level requirement as well.
One of the big ways to protect data is encryption.
Also Anti-virus software does indeed stop problematic javascript. Disabling SMT is a big performance hit to take. Its different with
games (Ryzen 9 3900X, SMT ON vs. SMT OFF, 36 Game Benchmark) its not a big deal if you have many cores but people report, "
30-40% lower cinnebench scores and 3d mark score".
Making sure there is enough security for compliance reasons may not require turning off SMT. The work load may require SMT for performance reasons.
Security systems are designed to deal with failures at some points. An attack on one PC system wont affect network firewalls or other security features. Servers run only the code that is veted to be run on them. There will never be code from an outside source run on them. Data is encryption at all times, even in memory. The server processes requests in one way and there is no code passed from client to server which can be executed.
Its hard to attack a server with this attack because it wont run any code from outside the server. If a computer on the network becomes infected and starts acting strange. Deep packet inspection will see the problem in the packets sent across the network and block the PC from the network. Also if reguests for server data is outside of the norn, then there can be an alarm or the traffic can be blocked.
You don't have to disable SMT on the server as code on the server is veted and there is no way to get outside code to execute. The server ifself cant access the internet, the devices that can access the internet request information from the server. This can be a web server or local network client.
So how do you work from home, if you need access. Well you use a VPN and that gets you inside the corperate network.
There are layers of security so one failure won't cause everything to come down like a house of cards.
With the virus scanning side of things. The stuff you download is sent to a proxy and passes through firewalls. It gets scanned before it reaches the client and blocked. Javascript can be removed. The client anti-virus is just a last line of defence.
There are also lots of areas were this bug could cause issues for security as well. There you may need to take action.