The issue isn't gone, unless the GPU is supported in some way other than by the slot and the metal bracket on its rear edge.The issue here is that the GPU is attached perpendicular to the motherboard producing a leverage effect that exerts strong forces on the slot. There is nothing that prevents the GPU to be physically attached in a parallel plane to the mother board and the issue is gone.
Thats what servers do to preserve the pizza box form factor.
I think the main way those servers get around the problem is by being so heavy that no one is going to subject them to the same kinds of shocks during shipping. Plus, even if they do fall off a tall stack of boxes, the server around the GPUs is so heavy that it tends to move in conjunction with the GPUs, so the force differential should be less.