I finally found a very good way to cool a hot CPU in the "PSU Base-Mounted; CPU Cooler Vertical; Rear & Top Vents" configuration you describe. The only important difference is that my Coolermaster CM-690 case has two top fan ports instead of the one in your example. I put an exhaust fan in the rearmost of these top panel ports, augmenting the rear panel exhaust fan. I put an intake fan in the foremost top port; there it blows cool air down to the DRAM and the intake area of the CPU fan. Both top panel fans were 120mm Scythe Kama Flex with a PWM control range of roughly 300-1600 RPM. These have fluid bearings for long life in a horizontal position where sleeve-bearing fans would fail early.
The key to success was the Akasa AK-CB002 PWM splitter ($4 at PerformancePCs). This lets you control up to three PWM fans from the single CPU fan PWM (4-pin) header on the motherboard. It has a large Molex connector so that all the fan power comes directly from your PSU. I used this PWM splitter to power the CPU fan and the two top panel fans. The rest of the setup is as you show: a front panel and bottom panel intake, and rear panel exhaust. These three fans run full speed at 1100-1200 RPM.
In normal operation the system fan / air noise is audible, but unobtrusive. Under heavy load the CPU fan spins up and brings the top panel intake and exhaust fans with it, providing plenty of air even for an overclocked quad-core. And this arrangment maintains positive pressure because there is always significantly more intake than exhaust capability. This prevents dust buildup on the internals. Of course all the intake fans have filters, and I chose a good CPU cooler. If a hot graphics card needs even more air, add a side-panel intake fan at 1100-1200 RPM.
The above scheme is reliable, relatively cheap, and almost fool-proof, using only the PWM CPU fan control found on any quality mobo. It will give you a quiet but thermally very capable machine.
The key to success was the Akasa AK-CB002 PWM splitter ($4 at PerformancePCs). This lets you control up to three PWM fans from the single CPU fan PWM (4-pin) header on the motherboard. It has a large Molex connector so that all the fan power comes directly from your PSU. I used this PWM splitter to power the CPU fan and the two top panel fans. The rest of the setup is as you show: a front panel and bottom panel intake, and rear panel exhaust. These three fans run full speed at 1100-1200 RPM.
In normal operation the system fan / air noise is audible, but unobtrusive. Under heavy load the CPU fan spins up and brings the top panel intake and exhaust fans with it, providing plenty of air even for an overclocked quad-core. And this arrangment maintains positive pressure because there is always significantly more intake than exhaust capability. This prevents dust buildup on the internals. Of course all the intake fans have filters, and I chose a good CPU cooler. If a hot graphics card needs even more air, add a side-panel intake fan at 1100-1200 RPM.
The above scheme is reliable, relatively cheap, and almost fool-proof, using only the PWM CPU fan control found on any quality mobo. It will give you a quiet but thermally very capable machine.