Well,you're mistaken. It can't do crap to the rig, it's a OEM Software, and they are the safest to fool around with. Especially since they say, USE a empty SSD.... I really don't see it effecting the hardware in ANYWAY what so ever, no controllers messed with, no BIOS setting sc***ed around with, no thermals effected.
But since you FEEL, that it could effect the rig. You ought to stick with just using the given features that the Mobo Manual and literature suggests...
So bottomline. If this satisfies you, is your mobo doesn't support SSD caching.