I am having my brother help me with a new board installation on Friday and thankfully my old board is still covered under warranty so it will be going back if the new board solves my problems.Have you in fact removed the board from the case, and made any attempt to boot it with absolute minimal connected hardware?
I mean, at this point just on principal I'm leaning way towards it being the board but really you want to eliminate everything else first. But, should be under warranty. Might just want to go that way first but it would suck to send it in only to find out it's something else.
I just thought I’d mention that as it seems strange the problems start once I restart.
I’ll report back when I have the new motherboard in, thanks for your help so far