You can get a Z68/Z77 mobo with dual x16 you just have to look. The P8Z77-V Pro Thunderbolt has Thunderbolt along with 3 PCIe 3.0/2.0 x16 lanes and up to 8 USB 3.0 ports (4 from the chipest and 4 from a ASMedia chip). The Premium has 4 full x16 PCIe 3.0 lanes. That though depends on what you plan to do. If you plan a single card, then two full x16 lanes are pointless. If you are doing CFX/SLI then it will benefit you in a few years when the GPUs start to take advantage of the faster bus since they can't saturate even x8 fully yet.
Its all a matter of looking. As for USB 3.0, I haven't seen any 990FX boards with more than 4 as the 990FX does not support USB3.0, much like the Z68 does not. The first chipset to support USB 3.0 is Z77. I like mine (I have 4, two in back and two in front using ASMedia) but I don't have anything that can use them. Kinda like Thunderbolt. While I would love to have it, nothing can truly use it yet.
The extra SATA 6 are nice but unless you plan to do more than two SSDs, pointless as most HDDs can't even saturate much beyond a SATA I connection. Once SSDs become the norm and cheaper it will make a difference.
As for the cheaper part, some are and some are not. It depends on which mobo maker and which series you get. As for the CPU, its cheaper right now just because the performance is not there. AMD will price accordingly, not based on the consumer. Thats why the HD7970 hit at $550 and was about $600 for a few months. AMD wants to make more money and when they can, their CPUs will be priced more like Intels are for their low to high end lineup.
Then again I just spent over $400 on a GPU which I haven't done since about 2004.......